Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN83488.1 | ALN86306.1 | LC55x_0183 | LC55x_3043 | Response regulator. | Diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. | 0.445 |
ALN83488.1 | ALN86647.1 | LC55x_0183 | LC55x_3388 | Response regulator. | Diguanylate cyclase domain protein. | 0.946 |
ALN83488.1 | ALN88073.1 | LC55x_0183 | LC55x_4825 | Response regulator. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.420 |
ALN83488.1 | ALN88578.1 | LC55x_0183 | LC55x_5332 | Response regulator. | Sensory box protein. | 0.697 |
ALN83488.1 | ALN88582.1 | LC55x_0183 | LC55x_5336 | Response regulator. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.558 |
ALN83488.1 | ALN88664.1 | LC55x_0183 | LC55x_5418 | Response regulator. | Response regulator. | 0.487 |
ALN84781.1 | ALN85021.1 | LC55x_1491 | LC55x_1734 | Sensory box protein. | Putative diguanylate cyclase/phosphodiesterase. | 0.851 |
ALN84781.1 | ALN86306.1 | LC55x_1491 | LC55x_3043 | Sensory box protein. | Diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. | 0.899 |
ALN84781.1 | ALN86647.1 | LC55x_1491 | LC55x_3388 | Sensory box protein. | Diguanylate cyclase domain protein. | 0.821 |
ALN84781.1 | ALN87827.1 | LC55x_1491 | LC55x_4579 | Sensory box protein. | Response regulator. | 0.988 |
ALN84781.1 | ALN88073.1 | LC55x_1491 | LC55x_4825 | Sensory box protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.990 |
ALN84781.1 | ALN88577.1 | LC55x_1491 | LC55x_5331 | Sensory box protein. | EAL domain protein. | 0.897 |
ALN84781.1 | ALN88578.1 | LC55x_1491 | LC55x_5332 | Sensory box protein. | Sensory box protein. | 0.990 |
ALN84781.1 | ALN88582.1 | LC55x_1491 | LC55x_5336 | Sensory box protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.988 |
ALN84781.1 | ALN88664.1 | LC55x_1491 | LC55x_5418 | Sensory box protein. | Response regulator. | 0.987 |
ALN85021.1 | ALN84781.1 | LC55x_1734 | LC55x_1491 | Putative diguanylate cyclase/phosphodiesterase. | Sensory box protein. | 0.851 |
ALN85021.1 | ALN86306.1 | LC55x_1734 | LC55x_3043 | Putative diguanylate cyclase/phosphodiesterase. | Diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. | 0.710 |
ALN85021.1 | ALN86647.1 | LC55x_1734 | LC55x_3388 | Putative diguanylate cyclase/phosphodiesterase. | Diguanylate cyclase domain protein. | 0.817 |
ALN85021.1 | ALN87827.1 | LC55x_1734 | LC55x_4579 | Putative diguanylate cyclase/phosphodiesterase. | Response regulator. | 0.878 |
ALN85021.1 | ALN88073.1 | LC55x_1734 | LC55x_4825 | Putative diguanylate cyclase/phosphodiesterase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.779 |
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