STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN88283.1[R] COG0666 FOG: Ankyrin repeat. (1116 aa)    
Predicted Functional Partners:
ALN88284.1
ycgL domain protein.
       0.879
ALN83498.1
Tetratricopeptide repeat family protein.
  
  0.814
ALN86716.1
Dolichyl-phosphate-mannose-mannosyltransferase family protein; [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
     0.753
ALN84211.1
O-Antigen ligase family protein.
  
     0.743
ALN84966.1
traB family protein.
  
     0.739
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.739
ALN88839.1
traB family protein.
  
     0.735
ALN83628.1
Outer membrane beta-barrel domain protein.
  
     0.734
ALN87736.1
Hypothetical protein.
  
     0.731
ALN83485.1
Ankyrin repeat family protein.
  
     0.724
Your Current Organism:
Lysobacter capsici
NCBI taxonomy Id: 435897
Other names: DSM 19286, KCTC 22007, L. capsici, Lysobacter capsici Park et al. 2008, Lysobacter sp. YC5194, strain YC5194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.