Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN88749.1 | ALN88784.1 | LC55x_5503 | LC55x_5538 | Glycosyl hydrolases 16 family protein. | Hypothetical protein. | 0.581 |
ALN88749.1 | ALN88820.1 | LC55x_5503 | LC55x_5574 | Glycosyl hydrolases 16 family protein. | Hypothetical protein. | 0.656 |
ALN88749.1 | ALN88822.1 | LC55x_5503 | LC55x_5576 | Glycosyl hydrolases 16 family protein. | Von Willebrand factor type A domain protein. | 0.670 |
ALN88749.1 | ALN88823.1 | LC55x_5503 | LC55x_5577 | Glycosyl hydrolases 16 family protein. | Hypothetical protein. | 0.437 |
ALN88749.1 | phoA | LC55x_5503 | LC55x_0276 | Glycosyl hydrolases 16 family protein. | Alkaline phosphatase. | 0.588 |
ALN88784.1 | ALN88749.1 | LC55x_5538 | LC55x_5503 | Hypothetical protein. | Glycosyl hydrolases 16 family protein. | 0.581 |
ALN88784.1 | ALN88820.1 | LC55x_5538 | LC55x_5574 | Hypothetical protein. | Hypothetical protein. | 0.685 |
ALN88784.1 | ALN88822.1 | LC55x_5538 | LC55x_5576 | Hypothetical protein. | Von Willebrand factor type A domain protein. | 0.685 |
ALN88784.1 | ALN88823.1 | LC55x_5538 | LC55x_5577 | Hypothetical protein. | Hypothetical protein. | 0.474 |
ALN88784.1 | phoA | LC55x_5538 | LC55x_0276 | Hypothetical protein. | Alkaline phosphatase. | 0.740 |
ALN88820.1 | ALN88749.1 | LC55x_5574 | LC55x_5503 | Hypothetical protein. | Glycosyl hydrolases 16 family protein. | 0.656 |
ALN88820.1 | ALN88784.1 | LC55x_5574 | LC55x_5538 | Hypothetical protein. | Hypothetical protein. | 0.685 |
ALN88820.1 | ALN88821.1 | LC55x_5574 | LC55x_5575 | Hypothetical protein. | Toxic anion resistance family protein. | 0.871 |
ALN88820.1 | ALN88822.1 | LC55x_5574 | LC55x_5576 | Hypothetical protein. | Von Willebrand factor type A domain protein. | 0.923 |
ALN88820.1 | ALN88823.1 | LC55x_5574 | LC55x_5577 | Hypothetical protein. | Hypothetical protein. | 0.897 |
ALN88820.1 | cysA-2 | LC55x_5574 | LC55x_5112 | Hypothetical protein. | Sulfate ABC transporter, ATP-binding family protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.742 |
ALN88820.1 | cysC | LC55x_5574 | LC55x_1370 | Hypothetical protein. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.962 |
ALN88820.1 | cysT | LC55x_5574 | LC55x_5110 | Hypothetical protein. | Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.756 |
ALN88820.1 | cysW | LC55x_5574 | LC55x_5111 | Hypothetical protein. | '[P] COG4208 ABC-type sulfate transport system, permease component'. | 0.746 |
ALN88820.1 | phoA | LC55x_5574 | LC55x_0276 | Hypothetical protein. | Alkaline phosphatase. | 0.654 |
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