Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_00675Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
IDSA_03100
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
IDSA_00700
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
IDSA_10040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
IDSA_04775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
IDSA_05030
N-carbamyl-L-amino acid amidohydrolase; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated; Belongs to the SeqA family.
  
     0.743
IDSA_06345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
IDSA_08480
Proline hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
IDSA_03925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
IDSA_09020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
IDSA_05315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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