Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_01425Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
IDSA_00260
Organic solvent ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.958
IDSA_00255
Toluene ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.880
IDSA_10430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.873
IDSA_01420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
IDSA_01415
Cystathionine gamma-synthase; Possible subunit of a heme lyase.
       0.797
IDSA_01245
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.744
IDSA_00250
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.701
IDSA_00245
ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.634
IDSA_01435
Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
IDSA_04295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.538
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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