Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IDSA_02420Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
IDSA_02415
Invasion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.880
IDSA_02410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.829
IDSA_02425
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
IDSA_03955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
IDSA_00600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
IDSA_00720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.668
IDSA_00620
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
IDSA_10785
Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.
  
    0.598
IDSA_01375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.