Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IDSA_03115Hypothetical protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. (183 aa)    
Predicted Functional Partners:
IDSA_07345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.898
IDSA_04930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
IDSA_09120
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
IDSA_10835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
IDSA_04960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
lptC
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
     0.745
IDSA_06505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
IDSA_04295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.717
IDSA_06170
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
proQ
Hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.709
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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