STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDSA_04075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
IDSA_04080
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.
       0.775
tyrA
Chorismate mutase; Catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.560
IDSA_07910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.503
IDSA_06040
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
IDSA_00720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.430
IDSA_01270
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.426
IDSA_10280
Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.426
IDSA_11395
RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.414
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.