STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDSA_04090Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
IDSA_04095
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
IDSA_04105
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
IDSA_04100
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.979
IDSA_00310
Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.968
IDSA_00315
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.967
IDSA_06340
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
IDSA_03825
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.953
IDSA_03830
Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
 0.951
IDSA_03735
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.906
IDSA_07895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.899
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.