STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDSA_04440Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology. (890 aa)    
Predicted Functional Partners:
IDSA_11195
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
IDSA_11190
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
IDSA_05385
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.728
IDSA_01750
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.699
IDSA_06645
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
IDSA_04435
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.682
IDSA_10535
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
IDSA_06215
Aminoacyl peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
IDSA_03560
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
IDSA_00825
Acyl-peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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