Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_05040Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)    
Predicted Functional Partners:
IDSA_00755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
IDSA_01010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
IDSA_01005
Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.766
IDSA_03820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
IDSA_05005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
IDSA_03130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
IDSA_05030
N-carbamyl-L-amino acid amidohydrolase; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated; Belongs to the SeqA family.
 
     0.760
IDSA_07340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
IDSA_05315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
IDSA_05045
Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
       0.743
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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