Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_07315Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
IDSA_00720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.846
IDSA_08420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.817
IDSA_02345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.810
IDSA_07260
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.798
IDSA_08805
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.758
IDSA_03000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.706
IDSA_11345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.644
IDSA_01270
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.628
IDSA_10280
Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.628
purK
Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR); Belongs to the PurK/PurT family.
       0.606
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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