Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_09370Heme transporter CcmB; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
IDSA_09400
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.649
IDSA_09375
Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.639
IDSA_09350
Regulator of cell morphoproteinsis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.618
IDSA_04095
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.580
IDSA_09405
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.538
IDSA_09420
Ribonucleotide reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.418
IDSA_09425
Ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
IDSA_04090
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.413
IDSA_04775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
IDSA_09430
Ribonucleoside-triphosphate reductase activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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