Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_10125Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
IDSA_10120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
tolR
Biopolymer transporter ExbD; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
   0.614
IDSA_02525
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.614
IDSA_10415
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.614
tolQ
Colicin uptake protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
   0.556
IDSA_02515
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.556
IDSA_02520
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.556
IDSA_10405
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.556
IDSA_10410
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.556
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.483
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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