Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_10480Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
IDSA_05965
Selenocysteine lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.743
IDSA_08950
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.743
IDSA_05320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
IDSA_10230
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.597
IDSA_10485
Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.551
phoR
Phosphate regulon sensor protein; Membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.514
IDSA_10475
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
IDSA_07020
Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
     
 0.459
IDSA_04655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.457
IDSA_04910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.424
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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