Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IDSA_10865Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
IDSA_00320
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
IDSA_00940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family.
   
    0.692
IDSA_00310
Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.657
IDSA_07355
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
IDSA_03810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
IDSA_10705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
IDSA_05005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
IDSA_00315
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.500
IDSA_09250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
IDSA_01010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
Your Current Organism:
Idiomarina salinarum
NCBI taxonomy Id: 435908
Other names: CCUG 54359, I. salinarum, Idiomarina salinarum Yoon et al. 2007, KCTC 12971, Pseudidiomarina salinarum, Pseudidiomarina salinarum (Yoon et al. 2007) Jean et al. 2009, strain ISL-52
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