STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165ZGS1Vesicular-fusion protein SEC17. (312 aa)    
Predicted Functional Partners:
A0A166NUX1
t-SNARE.
    
 0.996
A0A165WDR4
Snare protein YKT6; Belongs to the synaptobrevin family.
   
 0.993
A0A167X1J7
AAA-domain-containing protein.
    
 0.993
A0A166HB76
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.992
A0A166S049
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.992
A0A166XE47
t-SNARE; Belongs to the syntaxin family.
    
 0.992
A0A166PPC7
t-SNARE; Belongs to the syntaxin family.
    
 0.991
A0A166N3T2
Protein transport protein Sec22; Belongs to the synaptobrevin family.
   
 0.989
A0A166PIE8
V-snare-domain-containing protein.
   
 0.988
A0A166V044
t-SNARE coiled-coil homology domain-containing protein.
    
 0.988
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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