A0A166ADE9 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166ADE9

Uncharacterized protein. (459 aa)

Predicted Functional Partners:

A0A166U0I7

0.999

A0A165XT41

0.998

A0A166BCW4

0.998

A0A166HEX6

0.998

A0A166NY17

0.998

A0A166RMN0

0.998

A0A166SU07

0.998

A0A166UMF7

0.998

A0A166AW38

0.997

A0A166FKL2

0.996

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165XT41	A0A166ADE9	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A165XT41	A0A166AW38	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
A0A165XT41	A0A166BCW4	Uncharacterized protein.	RPOL4c domain-containing protein.	0.998
A0A165XT41	A0A166FKL2	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.999
A0A165XT41	A0A166HEX6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A165XT41	A0A166NY17	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
A0A165XT41	A0A166RMN0	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
A0A165XT41	A0A166SU07	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A165XT41	A0A166U0I7	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A165XT41	A0A166UMF7	Uncharacterized protein.	RPB5 subunit of DNA-directed RNA polymerase.	0.998
A0A166ADE9	A0A165XT41	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A166ADE9	A0A166AW38	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.997
A0A166ADE9	A0A166BCW4	Uncharacterized protein.	RPOL4c domain-containing protein.	0.998
A0A166ADE9	A0A166FKL2	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.996
A0A166ADE9	A0A166HEX6	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A166ADE9	A0A166NY17	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
A0A166ADE9	A0A166RMN0	Uncharacterized protein.	RPOLD domain-containing protein.	0.998
A0A166ADE9	A0A166SU07	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
A0A166ADE9	A0A166U0I7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A166ADE9	A0A166UMF7	Uncharacterized protein.	RPB5 subunit of DNA-directed RNA polymerase.	0.998