A0A166BM03 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166BM03

Carbohydrate-binding module family 1 protein. (254 aa)

Predicted Functional Partners:

A0A166SWN1

0.948

A0A166AYY9

0.936

A0A166WVC4

0.936

A0A166E0C6

0.909

A0A166V7U4

0.909

A0A166V8A0

0.909

A0A166GIQ7

0.899

A0A166NCM4

0.899

A0A166RT46

0.891

A0A166RT56

0.891

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A166AYY9	A0A166BM03	P-loop containing nucleoside triphosphate hydrolase protein.	Carbohydrate-binding module family 1 protein.	0.936
A0A166AYY9	A0A166E0C6	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.953
A0A166AYY9	A0A166GIQ7	P-loop containing nucleoside triphosphate hydrolase protein.	SKIP_SNW domain-containing protein.	0.651
A0A166AYY9	A0A166NCM4	P-loop containing nucleoside triphosphate hydrolase protein.	Cc.Cdc5 protein.	0.815
A0A166AYY9	A0A166RT46	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.790
A0A166AYY9	A0A166RT56	P-loop containing nucleoside triphosphate hydrolase protein.	PWI domain-containing protein.	0.839
A0A166AYY9	A0A166SWN1	P-loop containing nucleoside triphosphate hydrolase protein.	PRP38-domain-containing protein.	0.602
A0A166AYY9	A0A166V7U4	P-loop containing nucleoside triphosphate hydrolase protein.	MFAP1 domain-containing protein.	0.953
A0A166AYY9	A0A166V8A0	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.953
A0A166AYY9	A0A166WVC4	P-loop containing nucleoside triphosphate hydrolase protein.	C2H2-type domain-containing protein.	0.572
A0A166BM03	A0A166AYY9	Carbohydrate-binding module family 1 protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.936
A0A166BM03	A0A166E0C6	Carbohydrate-binding module family 1 protein.	Uncharacterized protein.	0.909
A0A166BM03	A0A166GIQ7	Carbohydrate-binding module family 1 protein.	SKIP_SNW domain-containing protein.	0.899
A0A166BM03	A0A166NCM4	Carbohydrate-binding module family 1 protein.	Cc.Cdc5 protein.	0.899
A0A166BM03	A0A166RT46	Carbohydrate-binding module family 1 protein.	Uncharacterized protein.	0.891
A0A166BM03	A0A166RT56	Carbohydrate-binding module family 1 protein.	PWI domain-containing protein.	0.891
A0A166BM03	A0A166SWN1	Carbohydrate-binding module family 1 protein.	PRP38-domain-containing protein.	0.948
A0A166BM03	A0A166V7U4	Carbohydrate-binding module family 1 protein.	MFAP1 domain-containing protein.	0.909
A0A166BM03	A0A166V8A0	Carbohydrate-binding module family 1 protein.	Uncharacterized protein.	0.909
A0A166BM03	A0A166WVC4	Carbohydrate-binding module family 1 protein.	C2H2-type domain-containing protein.	0.936