A0A166C9Y4 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166C9Y4

Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (623 aa)

Predicted Functional Partners:

A0A166GKV8

0.982

A0A166N6E3

0.982

A0A166S1K9

0.982

A0A166U294

0.982

A0A166AD24

0.980

A0A166F2Y7

0.980

A0A166HQ04

0.980

A0A166SAK8

0.979

A0A166MLL6

0.959

A0A166N5U5

0.946

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A166AD24	A0A166C9Y4	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.980
A0A166AD24	A0A166F2Y7	Uncharacterized protein.	WD40 repeat-like protein.	0.999
A0A166AD24	A0A166GKV8	Uncharacterized protein.	Metallo-hydrolase/oxidoreductase.	0.999
A0A166AD24	A0A166HQ04	Uncharacterized protein.	Suf-domain-containing protein.	0.996
A0A166AD24	A0A166MLL6	Uncharacterized protein.	Cofactor-independent phosphoglycerate mutase.	0.982
A0A166AD24	A0A166N5U5	Uncharacterized protein.	RNA-binding domain-containing protein.	0.846
A0A166AD24	A0A166N6E3	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
A0A166AD24	A0A166S1K9	Uncharacterized protein.	Fip1-domain-containing protein.	0.999
A0A166AD24	A0A166SAK8	Uncharacterized protein.	RRM domain-containing protein.	0.992
A0A166AD24	A0A166U294	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A166C9Y4	A0A166AD24	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.980
A0A166C9Y4	A0A166F2Y7	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	WD40 repeat-like protein.	0.980
A0A166C9Y4	A0A166GKV8	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Metallo-hydrolase/oxidoreductase.	0.982
A0A166C9Y4	A0A166HQ04	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Suf-domain-containing protein.	0.980
A0A166C9Y4	A0A166MLL6	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Cofactor-independent phosphoglycerate mutase.	0.959
A0A166C9Y4	A0A166N5U5	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RNA-binding domain-containing protein.	0.946
A0A166C9Y4	A0A166N6E3	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Cleavage and polyadenylation specificity factor subunit 2.	0.982
A0A166C9Y4	A0A166S1K9	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Fip1-domain-containing protein.	0.982
A0A166C9Y4	A0A166SAK8	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RRM domain-containing protein.	0.979
A0A166C9Y4	A0A166U294	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.982