Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A166CQP9 | A0A166EK87 | Phosphoserine aminotransferase. | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | 0.914 |
A0A166CQP9 | A0A166FH48 | Phosphoserine aminotransferase. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.979 |
A0A166CQP9 | A0A166JTM5 | Phosphoserine aminotransferase. | Tryptophan synthase. | 0.722 |
A0A166CQP9 | A0A166KYI4 | Phosphoserine aminotransferase. | Cysteine synthase. | 0.845 |
A0A166CQP9 | A0A166MZ11 | Phosphoserine aminotransferase. | Uncharacterized protein. | 0.707 |
A0A166CQP9 | A0A166P0V1 | Phosphoserine aminotransferase. | Pyridoxal phosphate-dependent enzyme, beta subunit. | 0.707 |
A0A166CQP9 | A0A166Q088 | Phosphoserine aminotransferase. | PLP-dependent transferase. | 0.743 |
A0A166CQP9 | A0A166QDU9 | Phosphoserine aminotransferase. | Bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase. | 0.646 |
A0A166CQP9 | A0A166VR51 | Phosphoserine aminotransferase. | Histidine biosynthesis trifunctional protein. | 0.770 |
A0A166CQP9 | A0A166X5R8 | Phosphoserine aminotransferase. | PALP-domain-containing protein. | 0.845 |
A0A166EK87 | A0A166CQP9 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Phosphoserine aminotransferase. | 0.914 |
A0A166EK87 | A0A166FH48 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.865 |
A0A166EK87 | A0A166JTM5 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Tryptophan synthase. | 0.805 |
A0A166EK87 | A0A166KYI4 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Cysteine synthase. | 0.751 |
A0A166EK87 | A0A166MZ11 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Uncharacterized protein. | 0.751 |
A0A166EK87 | A0A166P0V1 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Pyridoxal phosphate-dependent enzyme, beta subunit. | 0.751 |
A0A166EK87 | A0A166Q088 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | PLP-dependent transferase. | 0.900 |
A0A166EK87 | A0A166VR51 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | Histidine biosynthesis trifunctional protein. | 0.722 |
A0A166EK87 | A0A166X5R8 | Tryptophan synthase beta subunit-like PLP-dependent enzyme. | PALP-domain-containing protein. | 0.751 |
A0A166FH48 | A0A166CQP9 | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase. | 0.979 |
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