STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166D8W0Glycoside hydrolase family 16 protein. (306 aa)    
Predicted Functional Partners:
A0A166XBM3
RNA-binding domain-containing protein.
   
 0.921
A0A166QLX3
RNA-binding domain-containing protein.
   
 0.900
A0A166UZE5
Nuclear matrix protein NMP200.
   
 0.884
A0A166NCM4
Cc.Cdc5 protein.
   
 0.877
A0A166JDG9
Nuclear cap-binding protein subunit 2.
    
 0.851
A0A166AVZ0
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.837
A0A166V771
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.834
A0A166N5L5
Small nuclear ribo protein F.
   
 
 0.833
A0A166UN36
Uncharacterized protein.
   
 
 0.825
A0A166GJ86
RNA-binding domain-containing protein.
   
 0.824
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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