STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166DZE1Uncharacterized protein. (331 aa)    
Predicted Functional Partners:
A0A166SYT0
Clavaminate synthase-like protein.
    
 0.997
A0A166EJD6
RING/U-box.
    
 0.955
A0A166PEP8
TIP120-domain-containing protein.
   
 0.953
A0A166K6T4
Ubiquitin.
    
 0.951
A0A166AC46
Mov34-domain-containing protein.
    
 0.933
A0A166NRU9
E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.928
A0A166T0I0
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.925
A0A166BEF1
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.919
A0A166KX71
Uncharacterized protein.
   
 0.919
A0A166VBP1
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.914
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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