STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166E610Uncharacterized protein. (544 aa)    
Predicted Functional Partners:
A0A166DZL4
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
 0.939
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.925
A0A166UEH8
Ebp2-domain-containing protein.
   
 0.923
A0A166SCA6
Utp14-domain-containing protein.
   
 0.902
A0A166TI59
DEAD-domain-containing protein.
  
 
 0.901
A0A166V2Y7
RNA helicase.
  
 
0.890
A0A166LTJ1
RRM domain-containing protein.
   
 0.887
A0A166TZ92
TPR-like protein.
  
 0.882
A0A167XLX4
Nop14-like protein.
   
 0.879
A0A166KAP7
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.878
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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