Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A166AHY1 | A0A166GTT7 | Uncharacterized protein. | ARM repeat-containing protein. | 0.569 |
A0A166AHY1 | A0A166J385 | Uncharacterized protein. | NACHT domain-containing protein. | 0.925 |
A0A166AHY1 | A0A166M3E4 | Uncharacterized protein. | Uncharacterized protein. | 0.940 |
A0A166AHY1 | A0A166P4J9 | Uncharacterized protein. | ARM repeat-containing protein. | 0.998 |
A0A166AHY1 | A0A166PMV5 | Uncharacterized protein. | Structural maintenance of chromosomes protein. | 0.994 |
A0A166AHY1 | A0A166PNK0 | Uncharacterized protein. | Structural maintenance of chromosomes protein. | 0.994 |
A0A166AHY1 | A0A166PPP2 | Uncharacterized protein. | Sister chromatid cohesion protein. | 0.998 |
A0A166AHY1 | A0A166QAY4 | Uncharacterized protein. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.494 |
A0A166AHY1 | A0A166TLZ9 | Uncharacterized protein. | SCD domain-containing protein. | 0.999 |
A0A166AHY1 | A0A166UNL3 | Uncharacterized protein. | DNA/RNA polymerase. | 0.940 |
A0A166GTT7 | A0A166AHY1 | ARM repeat-containing protein. | Uncharacterized protein. | 0.569 |
A0A166GTT7 | A0A166J385 | ARM repeat-containing protein. | NACHT domain-containing protein. | 0.910 |
A0A166GTT7 | A0A166M3E4 | ARM repeat-containing protein. | Uncharacterized protein. | 0.477 |
A0A166GTT7 | A0A166P4J9 | ARM repeat-containing protein. | ARM repeat-containing protein. | 0.552 |
A0A166GTT7 | A0A166PMV5 | ARM repeat-containing protein. | Structural maintenance of chromosomes protein. | 0.929 |
A0A166GTT7 | A0A166PNK0 | ARM repeat-containing protein. | Structural maintenance of chromosomes protein. | 0.929 |
A0A166GTT7 | A0A166PPP2 | ARM repeat-containing protein. | Sister chromatid cohesion protein. | 0.423 |
A0A166GTT7 | A0A166QAY4 | ARM repeat-containing protein. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.999 |
A0A166GTT7 | A0A166TLZ9 | ARM repeat-containing protein. | SCD domain-containing protein. | 0.466 |
A0A166GTT7 | A0A166UNL3 | ARM repeat-containing protein. | DNA/RNA polymerase. | 0.477 |
page 1 of 6