STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166LDY2WD40 repeat-like protein. (1746 aa)    
Predicted Functional Partners:
A0A166JCF6
Cytochrome-c from the OXPHOS pathway; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.954
A0A166FYJ3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.864
A0A166S177
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.864
A0A166X028
TPR-like protein.
    
 0.822
A0A166S3B3
ATP-dependent RNA helicase.
    
 0.802
A0A166CND8
RNA polymerase II-associated protein.
    
 0.783
A0A166RC84
Uncharacterized protein.
   
 0.771
A0A166ABT4
Ribosomal protein L18ae.
    
  0.769
A0A166JP86
Uncharacterized protein.
    
 0.765
A0A166VJE5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
  0.758
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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