STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166PIG5Uncharacterized protein. (1075 aa)    
Predicted Functional Partners:
A0A166VQG4
UPF0183-domain-containing protein.
   
 
 0.952
A0A166RIZ9
WD40 repeat-like protein.
   
 
 0.881
A0A167XFA9
WD_REPEATS_REGION domain-containing protein.
   
  
 0.525
PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]
   
    0.503
A0A166HZY1
UBA domain-containing protein.
   
    0.477
A0A166A5V3
Uncharacterized protein.
   
    0.455
A0A166ET63
Uncharacterized protein.
   
    0.435
A0A166ET78
Uncharacterized protein.
   
    0.435
A0A166BCM0
SUN domain-containing protein.
   
    0.430
A0A166HES5
Mitochondrial carrier protein RIM2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
    0.429
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.