A0A166QQD0 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166QQD0

RNase III domain-containing protein. (428 aa)

Predicted Functional Partners:

A0A166BEG2

0.836

A0A166WXU5

0.829

A0A166N5V1

0.803

A0A165XSI6

0.799

A0A165Z3B2

0.799

A0A165ZGK1

0.799

A0A166D275

0.799

A0A166G828

0.799

A0A166KSJ6

0.799

A0A166M4U6

0.799

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165XSI6	A0A166QQD0	Piwi domain-containing protein.	RNase III domain-containing protein.	0.799
A0A165Z3B2	A0A166QQD0	DUF1785 domain-containing protein.	RNase III domain-containing protein.	0.799
A0A165ZGK1	A0A166QQD0	Piwi-domain-containing protein.	RNase III domain-containing protein.	0.799
A0A166BEG2	A0A166N5V1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A166BEG2	A0A166QQD0	Uncharacterized protein.	RNase III domain-containing protein.	0.836
A0A166BEG2	A0A166WXU5	Uncharacterized protein.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A166D275	A0A166QQD0	Piwi-domain-containing protein.	RNase III domain-containing protein.	0.799
A0A166G828	A0A166QQD0	Uncharacterized protein.	RNase III domain-containing protein.	0.799
A0A166KSJ6	A0A166QQD0	Piwi-domain-containing protein; Belongs to the argonaute family.	RNase III domain-containing protein.	0.799
A0A166M4U6	A0A166QQD0	Piwi-domain-containing protein.	RNase III domain-containing protein.	0.799
A0A166N5V1	A0A166BEG2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A166N5V1	A0A166QQD0	Uncharacterized protein.	RNase III domain-containing protein.	0.803
A0A166N5V1	A0A166WXU5	Uncharacterized protein.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A166QQD0	A0A165XSI6	RNase III domain-containing protein.	Piwi domain-containing protein.	0.799
A0A166QQD0	A0A165Z3B2	RNase III domain-containing protein.	DUF1785 domain-containing protein.	0.799
A0A166QQD0	A0A165ZGK1	RNase III domain-containing protein.	Piwi-domain-containing protein.	0.799
A0A166QQD0	A0A166BEG2	RNase III domain-containing protein.	Uncharacterized protein.	0.836
A0A166QQD0	A0A166D275	RNase III domain-containing protein.	Piwi-domain-containing protein.	0.799
A0A166QQD0	A0A166G828	RNase III domain-containing protein.	Uncharacterized protein.	0.799
A0A166QQD0	A0A166KSJ6	RNase III domain-containing protein.	Piwi-domain-containing protein; Belongs to the argonaute family.	0.799