A0A166RE64 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166RE64

Glycoside hydrolase family 79 protein. (779 aa)

Predicted Functional Partners:

A0A166GD51

0.480

A0A166HDG0

0.475

A0A166X0N1

0.475

A0A166MLI7

0.440

A0A166H7X0

0.437

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A166GD51	A0A166H7X0	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A166GD51	A0A166MLI7	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A166GD51	A0A166RE64	Uncharacterized protein.	Glycoside hydrolase family 79 protein.	0.480
A0A166H7X0	A0A166GD51	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A166H7X0	A0A166HDG0	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A166H7X0	A0A166RE64	Uncharacterized protein.	Glycoside hydrolase family 79 protein.	0.437
A0A166H7X0	A0A166X0N1	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A166HDG0	A0A166H7X0	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A166HDG0	A0A166MLI7	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A166HDG0	A0A166RE64	Uncharacterized protein.	Glycoside hydrolase family 79 protein.	0.475
A0A166MLI7	A0A166GD51	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A166MLI7	A0A166HDG0	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A166MLI7	A0A166RE64	Uncharacterized protein.	Glycoside hydrolase family 79 protein.	0.440
A0A166MLI7	A0A166X0N1	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A166RE64	A0A166GD51	Glycoside hydrolase family 79 protein.	Uncharacterized protein.	0.480
A0A166RE64	A0A166H7X0	Glycoside hydrolase family 79 protein.	Uncharacterized protein.	0.437
A0A166RE64	A0A166HDG0	Glycoside hydrolase family 79 protein.	Uncharacterized protein.	0.475
A0A166RE64	A0A166MLI7	Glycoside hydrolase family 79 protein.	Uncharacterized protein.	0.440
A0A166RE64	A0A166X0N1	Glycoside hydrolase family 79 protein.	Uncharacterized protein.	0.475
A0A166X0N1	A0A166H7X0	Uncharacterized protein.	Uncharacterized protein.	0.516