STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166T2N6P-loop containing nucleoside triphosphate hydrolase protein. (962 aa)    
Predicted Functional Partners:
A0A166TNE6
Smg4_UPF3 domain-containing protein.
    
 0.998
A0A166I2L5
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.995
A0A166HBU1
ARM repeat-containing protein.
   
 0.993
A0A166AYU7
RRM domain-containing protein.
    
 0.982
A0A166TCH0
RRM domain-containing protein.
    
 0.977
A0A166JDG9
Nuclear cap-binding protein subunit 2.
    
 0.971
A0A166KBE3
MIF4G domain-containing protein.
    
 0.968
A0A166VP56
Tr-type G domain-containing protein.
    
 0.968
A0A166VCY2
Peptide chain release factor eRF/aRF subunit 1.
   
 0.945
A0A165WN27
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
    
 0.939
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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