STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166VCY2Peptide chain release factor eRF/aRF subunit 1. (440 aa)    
Predicted Functional Partners:
A0A166VP56
Tr-type G domain-containing protein.
   
 0.999
A0A166NGX2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.995
A0A166U3B0
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.990
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.976
A0A166GMC1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.965
A0A166U4E8
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.962
A0A166WZ75
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.960
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.959
A0A166PNY1
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
  0.957
A0A166QMY9
40S ribosomal protein S20.
  
 0.957
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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