A0A166VDC3 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166VDC3

Ras-domain-containing protein. (224 aa)

Predicted Functional Partners:

A0A166AU91

0.995

A0A166EHE2

0.992

A0A166NC88

0.989

A0A165ZGD6

0.983

A0A166IHE7

0.983

A0A166PUX4

0.980

A0A166H0H9

0.978

A0A166M3U2

0.975

A0A166JV37

0.971

A0A166Q581

0.971

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165ZGD6	A0A166EHE2	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Sec2p domain-containing protein.	0.867
A0A165ZGD6	A0A166M3U2	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Ras-domain-containing protein.	0.998
A0A165ZGD6	A0A166PUX4	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Sec2p domain-containing protein.	0.751
A0A165ZGD6	A0A166VDC3	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Ras-domain-containing protein.	0.983
A0A166AU91	A0A166EHE2	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Sec2p domain-containing protein.	0.469
A0A166AU91	A0A166IHE7	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	RhoGAP-domain-containing protein.	0.738
A0A166AU91	A0A166NC88	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.426
A0A166AU91	A0A166PUX4	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Sec2p domain-containing protein.	0.420
A0A166AU91	A0A166VDC3	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Ras-domain-containing protein.	0.995
A0A166EHE2	A0A165ZGD6	Sec2p domain-containing protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.867
A0A166EHE2	A0A166AU91	Sec2p domain-containing protein.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.469
A0A166EHE2	A0A166H0H9	Sec2p domain-containing protein.	Uncharacterized protein.	0.797
A0A166EHE2	A0A166IHE7	Sec2p domain-containing protein.	RhoGAP-domain-containing protein.	0.457
A0A166EHE2	A0A166M3U2	Sec2p domain-containing protein.	Ras-domain-containing protein.	0.435
A0A166EHE2	A0A166NC88	Sec2p domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.871
A0A166EHE2	A0A166VDC3	Sec2p domain-containing protein.	Ras-domain-containing protein.	0.992
A0A166H0H9	A0A166EHE2	Uncharacterized protein.	Sec2p domain-containing protein.	0.797
A0A166H0H9	A0A166IHE7	Uncharacterized protein.	RhoGAP-domain-containing protein.	0.871
A0A166H0H9	A0A166JV37	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A166H0H9	A0A166M3U2	Uncharacterized protein.	Ras-domain-containing protein.	0.446