STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166VLP1Snare protein syntaxin 18/UFE1. (394 aa)    
Predicted Functional Partners:
A0A166N3T2
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.874
A0A166FG80
WD40 repeat-like protein.
    
 0.765
A0A166E268
Sec20-domain-containing protein.
    
  0.752
A0A166I7Q5
Chromo domain-containing protein.
    
 0.752
A0A166I841
Chromo domain-containing protein.
    
 0.752
A0A167TIC5
Sec20-domain-containing protein.
    
  0.752
A0A166S1S8
WD40 repeat-like protein.
    
 0.739
A0A166JED8
B30.2/SPRY domain-containing protein.
    
 0.715
A0A166KB99
WD40 repeat-like protein.
    
 0.714
A0A166BB13
JmjC-domain-containing protein.
   
 0.657
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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