A0A167U0W0 protein (Fibularhizoctonia sp. CBS109695)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A167U0W0

Uncharacterized protein. (479 aa)

Predicted Functional Partners:

A0A166U793

0.998

A0A166DZV3

0.948

A0A166G0W3

0.935

A0A166QPD9

0.935

A0A166W5M1

0.914

A0A166T2A2

0.912

A0A166S5E8

0.905

A0A166BXB7

0.890

A0A166F4D3

0.890

A0A166HQH0

0.890

Your Current Organism:

Fibularhizoctonia sp. CBS109695

NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A166BXB7	A0A166DZV3	STI1 domain-containing protein.	HSP20-like chaperone.	0.988
A0A166BXB7	A0A166G0W3	STI1 domain-containing protein.	PPIase cyclophilin-type domain-containing protein.	0.951
A0A166BXB7	A0A166QPD9	STI1 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.930
A0A166BXB7	A0A166U793	STI1 domain-containing protein.	SGS-domain-containing protein.	0.656
A0A166BXB7	A0A166W5M1	STI1 domain-containing protein.	Uncharacterized protein.	0.952
A0A166BXB7	A0A167U0W0	STI1 domain-containing protein.	Uncharacterized protein.	0.890
A0A166DZV3	A0A166BXB7	HSP20-like chaperone.	STI1 domain-containing protein.	0.988
A0A166DZV3	A0A166F4D3	HSP20-like chaperone.	TPR-like protein.	0.913
A0A166DZV3	A0A166G0W3	HSP20-like chaperone.	PPIase cyclophilin-type domain-containing protein.	0.990
A0A166DZV3	A0A166HQH0	HSP20-like chaperone.	DUF4470 domain-containing protein.	0.913
A0A166DZV3	A0A166QPD9	HSP20-like chaperone.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.986
A0A166DZV3	A0A166S5E8	HSP20-like chaperone.	Response regulatory domain-containing protein.	0.983
A0A166DZV3	A0A166U793	HSP20-like chaperone.	SGS-domain-containing protein.	0.982
A0A166DZV3	A0A166W5M1	HSP20-like chaperone.	Uncharacterized protein.	0.694
A0A166DZV3	A0A167U0W0	HSP20-like chaperone.	Uncharacterized protein.	0.948
A0A166F4D3	A0A166DZV3	TPR-like protein.	HSP20-like chaperone.	0.913
A0A166F4D3	A0A166G0W3	TPR-like protein.	PPIase cyclophilin-type domain-containing protein.	0.765
A0A166F4D3	A0A166QPD9	TPR-like protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.765
A0A166F4D3	A0A166U793	TPR-like protein.	SGS-domain-containing protein.	0.656
A0A166F4D3	A0A166W5M1	TPR-like protein.	Uncharacterized protein.	0.756