STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTLU_6061Annexin family transporter: Annexin A13. (301 aa)    
Predicted Functional Partners:
OSTLU_10107
Uncharacterized protein.
   
 0.730
CSD1
Sod_Cu domain-containing protein.
   
 0.702
OSTLU_51437
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.653
OSTLU_24535
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.635
OSTLU_37633
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.635
OSTLU_32601
Ammonium transporter.
    
 
 0.625
OSTLU_28535
Ammonium transporter.
    
 
 0.625
Rpb9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.591
OSTLU_14544
HABP4_PAI-RBP1 domain-containing protein.
     
 0.589
OSTLU_10510
Uncharacterized protein.
     
 0.586
Your Current Organism:
Ostreococcus lucimarinus
NCBI taxonomy Id: 436017
Other names: O. lucimarinus CCE9901, Ostreococcus lucimarinus CCE9901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.