STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTLU_95019SP-RING-type domain-containing protein. (380 aa)    
Predicted Functional Partners:
Pap2
Phosphatidic acid Phosphatase-related protein.
    
 0.930
OSTLU_42569
Ubiquitin-like domain-containing protein.
    
 0.930
OSTLU_24651
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.928
OSTLU_33350
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.928
OSTLU_41357
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.811
OSTLU_28271
SP-RING-type domain-containing protein.
    
 
 0.781
OSTLU_28951
Uncharacterized protein.
    
 
 0.748
ARID3501
ARID domain-containing protein.
   
 0.728
OSTLU_17621
TOPEUc domain-containing protein.
   
 
 0.721
Rbx1
RING-box protein 1.
   
 
 0.715
Your Current Organism:
Ostreococcus lucimarinus
NCBI taxonomy Id: 436017
Other names: O. lucimarinus CCE9901, Ostreococcus lucimarinus CCE9901
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