STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD65691.1PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: pca:Pcar_0380 hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACD65690.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: chu:CHU_1418 hypothetical protein.
 
     0.952
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.773
ACD65688.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aae:aq_495 bacterioferritin comigratory protein.
       0.732
ACD66588.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gur:Gura_4076 ErfK/YbiS/YcfS/YnhG family protein.
 
     0.660
ACD66646.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gur:Gura_4076 ErfK/YbiS/YcfS/YnhG family protein.
 
     0.610
ACD66146.1
PFAM: beta-lactamase domain protein; KEGG: aae:aq_974 beta lactamase precursor.
   
    0.465
ACD67336.1
PFAM: beta-lactamase domain protein; KEGG: aae:aq_2135 hypothetical protein.
   
    0.465
Your Current Organism:
Sulfurihydrogenibium sp. YO3AOP1
NCBI taxonomy Id: 436114
Other names: S. sp. YO3AOP1
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