STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD65987.1TIGRFAM: transposase; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: tte:TTE0855 hypothetical protein. (553 aa)    
Predicted Functional Partners:
ACD66748.1
PFAM: Rubrerythrin; KEGG: aae:aq_331 hypothetical protein.
  
     0.713
ACD66582.1
KEGG: sat:SYN_03850 hypothetical membrane protein.
  
     0.678
bpsA
Protein of unknown function DUF43; Involved in the biosynthesis of branched-chain polyamines, which support the growth of thermophiles under high-temperature conditions. Catalyzes the sequential condensation of spermidine with the aminopropyl groups of decarboxylated S-adenosylmethionines to produce N(4)-bis(aminopropyl)spermidine via N(4)-aminopropylspermidine.
  
     0.662
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.615
ACD67315.1
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: aae:aq_1459 neutral protease.
  
     0.608
ACD66445.1
PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bbt:BBta_2511 putative oxidase.
  
     0.584
ACD67353.1
PFAM: polysaccharide deacetylase; KEGG: fnu:FN0541 hypothetical cytosolic protein.
  
     0.482
ACD66754.1
KEGG: pae:PA4312 hypothetical protein.
  
     0.478
ACD65986.1
PFAM: HMG-I and HMG-Y DNA-binding domain protein.
       0.468
ACD65956.1
PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1295 secretion protein HlyD family protein.
  
     0.449
Your Current Organism:
Sulfurihydrogenibium sp. YO3AOP1
NCBI taxonomy Id: 436114
Other names: S. sp. YO3AOP1
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