STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD66823.1PFAM: histone deacetylase superfamily; KEGG: aae:aq_2110 acetoin utilization protein. (306 aa)    
Predicted Functional Partners:
ACD66515.1
KEGG: cbe:Cbei_2643 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases.
  
 
 0.903
ACD66086.1
PFAM: WD-40 repeat protein; KEGG: sun:SUN_0305 periplasmic nitrate reductase component NapL.
    
 0.815
ACD67160.1
PFAM: PEGA domain protein; KEGG: tma:TM0841 S-layer-like array protein.
    
 0.815
ACD66922.1
PFAM: Silent information regulator protein Sir2; KEGG: nis:NIS_0515 transcriptional regulator, Sir2 family.
    
 
 0.722
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
       0.689
ACD66033.1
KEGG: shl:Shal_3567 putative membrane protein of unknown function.
    
 0.686
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.678
ACD66826.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.678
ACD66827.1
PFAM: periplasmic solute binding protein; KEGG: ctc:CTC02360 high-affinity Zinc uptake system protein znuA; Belongs to the bacterial solute-binding protein 9 family.
       0.678
ACD66828.1
PFAM: metallophosphoesterase; KEGG: drm:Dred_2179 metallophosphoesterase.
       0.678
Your Current Organism:
Sulfurihydrogenibium sp. YO3AOP1
NCBI taxonomy Id: 436114
Other names: S. sp. YO3AOP1
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