STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD67170.1KEGG: pmo:Pmob_1250 hypothetical protein. (311 aa)    
Predicted Functional Partners:
ACD67171.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: aae:aq_157 putative protein.
       0.768
ACD67167.1
TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: tth:TTC1958 probable nucleotidyltransferase.
 
     0.755
ACD67315.1
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: aae:aq_1459 neutral protease.
  
     0.641
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.625
ACD67168.1
PFAM: DNA polymerase beta domain protein region; KEGG: nis:NIS_0140 nucleotidyltransferase.
       0.625
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.625
ACD67091.1
KEGG: ana:all4381 hypothetical protein.
  
     0.598
ACD66132.1
KEGG: pmo:Pmob_1534 hypothetical protein.
  
     0.592
ACD65678.1
PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein.
  
     0.538
ACD66131.1
PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: pmo:Pmob_1535 helicase domain protein.
  
     0.494
Your Current Organism:
Sulfurihydrogenibium sp. YO3AOP1
NCBI taxonomy Id: 436114
Other names: S. sp. YO3AOP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.