STRINGSTRING
Nmar_0075 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0075" - Dolichyl-diphosphooligosaccharide--protein glycotransferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0075Dolichyl-diphosphooligosaccharide--protein glycotransferase; PFAM- Oligosaccharyl transferase STT3 subunit; KEGG- ddi-DDB_0230191 oligosaccharyl transferase, STT3 subunit (712 aa)    
Predicted Functional Partners:
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (154 aa)
   
      0.850
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (93 aa)
 
 
      0.849
Nmar_0391
PFAM- Ribosomal protein L32e; KEGG- pai-PAE2099 ribosomal protein L32 (134 aa)
   
 
      0.825
rpl31e
PFAM- Ribosomal protein L31e; KEGG- aor-AO090011000451 predicted protein Pfam- Collagen PROSITE- GLN_RICH GLU_RICH GLY_RICH LYS_RICH; Belongs to the ribosomal protein L31e family (187 aa)
   
 
      0.806
rpl22
50S ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (152 aa)
   
 
      0.773
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (288 aa)
   
      0.773
rpl24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (168 aa)
   
 
      0.752
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (88 aa)
     
      0.701
Nmar_1125
KEGG- sso-SSO5336 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family (55 aa)
       
      0.701
rpl14
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (140 aa)
       
      0.701
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]