STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0178PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rha:RHA1_ro06497 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Nmar_0179
Hypothetical protein.
       0.974
Nmar_0180
PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: mbu:Mbur_1974 NADPH-dependent F420 reductase.
 
     0.820
Nmar_0181
PFAM: Phosphoglycerate mutase; KEGG: sto:ST2120 hypothetical protein.
       0.545
Nmar_0787
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rxy:Rxyl_1056 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
  
     0.545
Nmar_0878
KEGG: nfa:nfa4250 hypothetical protein.
  
     0.530
Nmar_0185
PFAM: blue (type 1) copper domain protein; KEGG: mmp:MMP0997 blue (type 1) copper domain.
 
     0.459
Nmar_0182
Hypothetical protein.
       0.432
Nmar_0183
PFAM: cytochrome c oxidase subunit II; KEGG: noc:Noc_1244 cytochrome c oxidase, subunit II.
       0.432
Nmar_0186
KEGG: hma:pNG6071 hypothetical protein.
 
     0.416
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.