STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0282PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: syn:sll0521 NADH dehydrogenase I subunit 6. (170 aa)    
Predicted Functional Partners:
Nmar_0277
KEGG: sma:SAV4882 putative NADH dehydrogenase subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
  
 
 0.999
Nmar_0278
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: sto:ST2217 hypothetical NADH-plastoquinone oxidoreductase subunit 5.
 
 
 0.999
Nmar_0279
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: ape:APE_1422 NADH dehydrogenase I chain D; Belongs to the complex I 49 kDa subunit family.
  
 
 0.999
Nmar_0280
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: btk:BT9727_4978 NADH dehydrogenase I, subunit H (NADH-quinone oxidoreductase, chain H).
 
 
 0.999
Nmar_0281
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: smr:Smar_0649 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.999
Nmar_0283
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mtp:Mthe_1057 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.999
Nmar_0285
KEGG: tpe:Tpen_1087 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.999
Nmar_0286
KEGG: mba:Mbar_A3401 F420H2 dehydrogenase subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.999
Nmar_0276
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rca:Rcas_2088 NADH-ubiquinone/plastoquinone oxidoreductase chain 3.
 
 
 0.998
Nmar_0284
KEGG: tpe:Tpen_1086 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
     
 0.841
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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