STRINGSTRING
Nmar_0305 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0305" - annotation not available in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0305annotation not available (115 aa)    
Predicted Functional Partners:
Nmar_0306
KEGG- mse-Msed_1909 hypothetical protein (253 aa)
              0.839
Nmar_0304
annotation not available (129 aa)
              0.665
Nmar_0307
PFAM- Protein of unknown function UPF0147; KEGG- hbu-Hbut_1631 hypothetical protein; Belongs to the UPF0147 family (89 aa)
              0.656
Nmar_0308
PFAM- Rieske [2Fe-2S] domain protein; KEGG- rca-Rcas_2708 Rieske (2Fe-2S) domain protein (102 aa)
              0.569
Nmar_0309
PFAM- GCN5-related N-acetyltransferase; KEGG- nph-NP2494A protein N-acetyltransferase homolog (258 aa)
              0.429
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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