STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0341Cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: chy:CHY_2199 cysteine desulfurase. (388 aa)    
Predicted Functional Partners:
Nmar_0498
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rrs:RoseRS_0711 SUF system FeS assembly protein, NifU family.
 
 0.999
Nmar_1548
PFAM: UBA/THIF-type NAD/FAD binding protein; thiamineS protein; MoeZ/MoeB domain protein; KEGG: wsu:WS1006 molybdopterin biosynthesis protein MoeB.
   
 0.999
Nmar_0339
PFAM: protein of unknown function DUF111; KEGG: mmz:MmarC7_1273 protein of unknown function DUF111.
       0.974
Nmar_0340
PFAM: ExsB family protein; PP-loop domain protein; KEGG: dsy:DSY3982 hypothetical protein.
       0.974
Nmar_0669
PFAM: SirA family protein; KEGG: sai:Saci_0335 hypothetical protein.
   
 
 0.933
Nmar_0441
PFAM: Rhodanese domain protein; KEGG: ttj:TTHA1028 thiosulfate sulfurtransferase.
  
 0.922
Nmar_0680
PFAM: Rhodanese domain protein; KEGG: bcy:Bcer98_1310 rhodanese domain protein.
  
 0.922
Nmar_1697
PFAM: Rhodanese domain protein; KEGG: noc:Noc_0191 thiosulfate sulfurtransferase.
  
 0.922
Nmar_1303
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gtn:GTNG_2906 HesB protein.
  
  
 0.846
dnaK
Chaperone protein DnaK; Acts as a chaperone.
 
  
 0.756
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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