STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0372Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: fno:Fnod_0879 PAS/PAC sensor signal transduction histidine kinase. (505 aa)    
Predicted Functional Partners:
Nmar_1206
PFAM: response regulator receiver; KEGG: afu:AF1384 response regulator.
 
 
   0.770
Nmar_1202
PFAM: response regulator receiver; KEGG: afu:AF2249 response regulator.
 
 
   0.756
Nmar_0376
PFAM: response regulator receiver; KEGG: pho:PH0482 chemotaxis protein cheY.
 
 
 
 0.641
Nmar_0371
PFAM: glucose sorbosone dehydrogenase; KEGG: rxy:Rxyl_0504 glucose sorbosone dehydrogenase.
       0.618
Nmar_0373
Hypothetical protein.
       0.552
Nmar_1774
KEGG: smr:Smar_1238 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family.
   
 0.460
rpl12
Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family.
       0.447
Nmar_1713
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1668 lipoprotein releasing system, ATP-binding protein.
 
  
 0.429
Nmar_0168
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: pho:PH1742 putative UDP-glucose 4-epimerase.
 
  
 0.415
Nmar_1146
KEGG: rca:Rcas_1750 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein.
 
  
 0.414
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.