STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0572KEGG: gfo:GFO_2079 conserved hypothetical protein, membrane. (421 aa)    
Predicted Functional Partners:
Nmar_0571
KEGG: cbe:Cbei_1251 hypothetical protein.
       0.773
Nmar_0573
PFAM: Ferritin Dps family protein; KEGG: fjo:Fjoh_0866 ferroxidase.
     
 0.757
Nmar_0570
PFAM: methyladenine glycosylase; KEGG: cbe:Cbei_2823 DNA-3-methyladenine glycosylase I.
       0.679
Nmar_0330
PFAM: ABC-3 protein; KEGG: rrs:RoseRS_3068 ABC-3 protein.
  
  
 0.599
Nmar_0331
PFAM: ABC-3 protein; KEGG: rca:Rcas_1721 transcriptional regulator, MarR family.
  
  
 0.599
Nmar_1653
PFAM: ABC-3 protein; KEGG: tdn:Tmden_2063 ABC-3.
  
  
 0.599
Nmar_0569
Hypothetical protein.
       0.497
Nmar_0556
Histidine kinase; PFAM: Extracellular ligand-binding receptor; ATP-binding region ATPase domain protein; KEGG: syn:slr1753 hypothetical protein.
   
 
 0.494
Nmar_0329
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related.
  
  
 0.429
Nmar_1654
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK4031 cation ABC transporter, ATP-binding protein.
  
  
 0.429
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.