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Nmar_0702 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0702" - TIGRFAM: PAS sensor protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0702TIGRFAM- PAS sensor protein; PFAM- PAS fold-3 domain protein; PAS fold domain protein; KEGG- sat-SYN_02593 transcriptional regulator GerE family (174 aa)    
Predicted Functional Partners:
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (340 aa)
              0.710
Nmar_0705
PFAM- transcriptional regulator TrmB; KEGG- neq-NEQ098 predicted transcription regulator (283 aa)
 
          0.706
Nmar_0616
KEGG- mtp-Mthe_0393 hypothetical protein (1096 aa)
   
          0.618
Nmar_0503
KEGG- rha-RHA1_ro00689 hypothetical protein (317 aa)
   
          0.607
Nmar_0704
annotation not available (266 aa)
              0.606
Nmar_0754
Uncharacterized protein; KEGG- tva-TVAG_005450 conserved hypothetical protein Pfam- DASH_Dad4 TolA PROSITE- ASP_RICH GLU_RICH LYS_RICH (493 aa)
   
          0.604
Nmar_0231
PFAM- Ig family protein; KEGG- rci-RRC213 hypothetical protein (556 aa)
   
          0.581
Nmar_0445
Uncharacterized protein; KEGG- tva-TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein Pfam- DUF683 TBPIP bZIP_1 Tektin HalX PspA_IM30 Tup_N GBP_C Vicilin_N priB_priC DMPK_coil PLU-1 DUF812 Cortex-I_coil HALZ LMP UVR ATG16 Prefoldin_2 Syntaxin-6_N Myosin_tail_1 Spectrin Tropomyosin DUF904 SpoOE-like Rab5-bind Filament DUF593 HSBP1 TPR_MLP1_2 Nnf1 PROSITE- GLU_RICH LYS_RICH (509 aa)
   
          0.578
Nmar_1366
Methyltransferase type 11; PFAM- protein of unknown function DUF343; Methyltransferase type 11 (288 aa)
   
          0.570
Nmar_0906
KEGG- pub-SAR11_0482 hypothetical protein (223 aa)
   
          0.550
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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