STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0725Conserved hypothetical protein; KEGG: mka:MK0421 uncharacterized enzyme of the ATP-grasp superfamily. (226 aa)    
Predicted Functional Partners:
Nmar_1366
Methyltransferase type 11; PFAM: protein of unknown function DUF343; Methyltransferase type 11.
  
     0.558
Nmar_1147
SMART: regulatory protein AsnC/Lrp family; KEGG: msi:Msm_1032 transcriptional regulator, Lrp family.
  
     0.551
Nmar_1683
Cell division control protein 6 family protein; Involved in regulation of DNA replication.
  
     0.534
Nmar_0726
PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: bvi:Bcep1808_7539 SNF2-related protein.
       0.454
rnp1
Ribonuclease P, Rpp29; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 1 family.
  
     0.447
polC
DNA polymerase II, large subunit DP2; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase.
  
     0.435
Nmar_1469
KEGG: tac:Ta0950 hypothetical protein.
 
     0.423
Nmar_1628
SMART: regulatory protein ArsR; KEGG: mvn:Mevan_1241 anaerobic ribonucleoside-triphosphate reductase.
  
     0.419
pfdB
Prefoldin, beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
  
     0.412
Nmar_1509
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mbu:Mbur_1505 phosphoesterase, RecJ-like protein.
  
     0.408
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.