STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0977PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: ppd:Ppro_3201 NAD-dependent epimerase/dehydratase. (459 aa)    
Predicted Functional Partners:
Nmar_0278
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: sto:ST2217 hypothetical NADH-plastoquinone oxidoreductase subunit 5.
   
 0.950
Nmar_0279
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: ape:APE_1422 NADH dehydrogenase I chain D; Belongs to the complex I 49 kDa subunit family.
   
 0.947
Nmar_0281
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: smr:Smar_0649 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
 0.947
Nmar_0277
KEGG: sma:SAV4882 putative NADH dehydrogenase subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
   
 0.943
Nmar_1544
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mse:Msed_1191 Rieske (2Fe-2S) domain protein.
  
 
 0.920
Nmar_0276
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rca:Rcas_2088 NADH-ubiquinone/plastoquinone oxidoreductase chain 3.
   
 0.881
Nmar_0286
KEGG: mba:Mbar_A3401 F420H2 dehydrogenase subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 0.877
Nmar_0280
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: btk:BT9727_4978 NADH dehydrogenase I, subunit H (NADH-quinone oxidoreductase, chain H).
   
 0.875
Nmar_1543
PFAM: Cytochrome b/b6 domain; KEGG: sto:ST1667 hypothetical cytochrome b.
   
 
 0.809
Nmar_0261
KEGG: hbu:Hbut_0157 succinate dehydrogenase/fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   
 
 0.646
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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